@prefix rdfs:    <http://www.w3.org/2000/01/rdf-schema#> .
@prefix foaf:    <http://xmlns.com/foaf/0.1/> .

[]    <http://www.w3.org/1999/02/22-rdf-syntax-ns#type>
              <http://usefulinc.com/ns/doap#Project> ;
      <http://usefulinc.com/ns/doap#homepage>
              <http://www4.wiwiss.fu-berlin.de/pubby/> ;
      <http://usefulinc.com/ns/doap#release>
              _:b1 .

<https://research.tib.eu/covid-19/entity/bd9w0a1c>
      <http://www.w3.org/1999/02/22-rdf-syntax-ns#type>
              <https://research.tib.eu/covid-19/vocab/Publication> ;
      <http://purl.org/dc/terms/abstract>
              "COVID-19, a disease caused by a new strain of coronavirus (SARS-CoV-2) originating from Wuhan, China, has now spread around the world, triggering a global pandemic, leaving the public eagerly awaiting the development of a specific medicine and vaccine In response, aggressive efforts are underway around the world to overcome COVID-19 In this study, referencing the data published on the Protein Data Bank (PDID: 7BV2) on April 22, we conducted a detailed analysis of the interaction between the complex structures of the RNA-dependent RNA polymerase (RdRp) of SARS-CoV-2 and Remdesivir, an antiviral drug, from the quantum chemical perspective based on the fragment molecular orbital (FMO) method In addition to the hydrogen bonding and intra-strand stacking between complementary strands as seen in normal base pairs, Remdesivir bound to the terminus of an primer-RNA strand was further stabilized by diagonal Ï€-Ï€ stacking with the -1A base of the complementary strand and an additional hydrogen bond with an intra-strand base, due to the effect of chemically modified functional group Moreover, stable OH/Ï€ interaction is also formed with Thr687 of the RdRp We quantitatively revealed the exhaustive interaction within the complex among Remdesivir, template-primer-RNA, RdRand co-factors, and published the results in the FMODdatabase" ;
      <http://purl.org/dc/terms/creator>
              <https://research.tib.eu/covid-19/entity/Koichiro%2C_Kato_Teruki_Honma_Kaori_Fukuzawa> ;
      <http://purl.org/dc/terms/title>
              "Intermolecular Interaction Among Remdesivir, RNA and RNA-Dependent RNA Polymerase of SARS-CoV-2 Analyzed by Fragment Molecular Orbital Calculation" ;
      <https://research.tib.eu/covid-19/vocab/license>
              "unk" ;
      <https://research.tib.eu/covid-19/vocab/publication_isRelatedTo_Disease>
              <https://research.tib.eu/covid-19/entity/COVID-19> ;
      <https://research.tib.eu/covid-19/vocab/source>
              "WHO" ;
      <https://research.tib.eu/covid-19/vocab/who_covidence_id>
              "#188" ;
      <https://research.tib.eu/covid-19/vocab/year>
              "2020" .

_:b1  <http://www.w3.org/1999/02/22-rdf-syntax-ns#type>
              <http://usefulinc.com/ns/doap#Version> ;
      <http://usefulinc.com/ns/doap#revision>
              "0.4" .

<https://research.tib.eu/covid-19/entity/bd9w0a1c_hasAnnotation_C5203676>
      <https://research.tib.eu/covid-19/vocab/annotates>
              <https://research.tib.eu/covid-19/entity/bd9w0a1c> .

<https://research.tib.eu/covid-19/entity/bd9w0a1c_hasAnnotation_C0035668>
      <https://research.tib.eu/covid-19/vocab/annotates>
              <https://research.tib.eu/covid-19/entity/bd9w0a1c> .

<https://research.tib.eu/covid-19/data/entity/bd9w0a1c?output=ttl>
      rdfs:label "RDF description of bd9w0a1c" ;
      foaf:primaryTopic <https://research.tib.eu/covid-19/entity/bd9w0a1c> .

_:b2  <http://www.w3.org/1999/02/22-rdf-syntax-ns#type>
              <http://purl.org/net/provenance/ns#Actor> , <http://purl.org/net/provenance/ns#DataProvidingService> , <http://purl.org/net/provenance/types#DataCreatingService> ;
      rdfs:seeAlso <https://research.tib.eu/covid-19/> ;
      <http://purl.org/net/provenance/ns#deployedSoftware>
              _:b1 .

[]    <http://rdfs.org/ns/void#sparqlEndpoint>
              <https://labs.tib.eu/sdm/covid19kg/sparql> .

<https://labs.tib.eu/sdm/covid19kg/sparql>
      <http://www.w3.org/1999/02/22-rdf-syntax-ns#type>
              <http://purl.org/net/provenance/ns#Actor> , <http://purl.org/net/provenance/types#DataCreatingService> .

_:b3  <http://www.w3.org/1999/02/22-rdf-syntax-ns#type>
              <http://purl.org/net/provenance/ns#DataItem> , <http://www.w3.org/2004/03/trix/rdfg-1/Graph> ;
      <http://purl.org/net/provenance/ns#createdBy>
              _:b4 ;
      <http://www.ontologydesignpatterns.org/cp/owl/informationrealization.owl#realizes>
              <https://research.tib.eu/covid-19/data/entity/bd9w0a1c> ;
      foaf:primaryTopic <https://research.tib.eu/covid-19/entity/bd9w0a1c> ;
      foaf:topic _:b3 .

_:b5  <http://www.w3.org/1999/02/22-rdf-syntax-ns#type>
              <http://purl.org/net/provenance/types#SPARQLQuery> , <http://spinrdf.org/sp#Describe> ;
      rdfs:label "DESCRIBE <http://research.tib.eu/covid-19/entity/bd9w0a1c>"^^<http://www.w3.org/2001/XMLSchema#string> .

_:b6  <http://www.w3.org/1999/02/22-rdf-syntax-ns#type>
              <http://purl.org/net/provenance/types#QueryResult> , <http://purl.org/net/provenance/ns#DataItem> , <http://www.w3.org/2004/03/trix/rdfg-1/Graph> ;
      <http://purl.org/net/provenance/ns#createdBy>
              _:b7 ;
      <http://purl.org/net/provenance/ns#retrievedBy>
              _:b8 .

_:b8  <http://www.w3.org/1999/02/22-rdf-syntax-ns#type>
              <http://purl.org/net/provenance/ns#DataAccess> ;
      <http://purl.org/net/provenance/ns#accessedService>
              <https://labs.tib.eu/sdm/covid19kg/sparql> ;
      <http://purl.org/net/provenance/ns#performedAt>
              "2026-05-18T17:32:42.07Z"^^<http://www.w3.org/2001/XMLSchema#dateTime> ;
      <http://purl.org/net/provenance/ns#performedBy>
              _:b2 .

_:b4  <http://www.w3.org/1999/02/22-rdf-syntax-ns#type>
              <http://purl.org/net/provenance/ns#DataCreation> ;
      <http://purl.org/net/provenance/ns#performedAt>
              "2026-05-18T17:32:42.07Z"^^<http://www.w3.org/2001/XMLSchema#dateTime> ;
      <http://purl.org/net/provenance/ns#performedBy>
              _:b2 ;
      <http://purl.org/net/provenance/ns#usedData>
              _:b6 .

_:b7  <http://www.w3.org/1999/02/22-rdf-syntax-ns#type>
              <http://purl.org/net/provenance/ns#DataCreation> , <http://purl.org/net/provenance/types#QueryExecution> ;
      <http://purl.org/net/provenance/ns#performedBy>
              <https://labs.tib.eu/sdm/covid19kg/sparql> ;
      <http://purl.org/net/provenance/ns#usedGuideline>
              _:b5 .
