PropertyValue
?:abstract
  • SUMMARY: While over 200 000 genomic sequences are currently available through dedicated repositories, ad hoc methods for the functional annotation of SARS-CoV-2 genomes do not harness all currently available resources for the annotation of functionally relevant genomic sites. Here, we present CorGAT, a novel tool for the functional annotation of SARS-CoV-2 genomic variants. By comparisons with other state of the art methods we demonstrate that, by providing a more comprehensive and rich annotation, our method can facilitate the identification of evolutionary patterns in the genome of SARS-CoV-2. AVAILABILITYAND IMPLEMENTATION: Galaxy : http://corgat.cloud.ba.infn.it/galaxy; software: https://github.com/matteo14c/CorGAT/tree/Revision_V1; docker: https://hub.docker.com/r/laniakeacloud/galaxy_corgat. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.
is ?:annotates of
?:creator
?:doi
?:doi
  • 10.1093/bioinformatics/btaa1047
?:journal
  • Bioinformatics
?:license
  • no-cc
?:pdf_json_files
  • document_parses/pdf_json/98061c420df170b08add76ab5a1230d09786d451.json
?:pmc_json_files
  • document_parses/pmc_json/PMC7799324.xml.json
?:pmcid
?:pmid
?:pmid
  • 33346830.0
?:publication_isRelatedTo_Disease
?:sha_id
?:source
  • Medline; PMC
?:title
  • CorGAT: a tool for the functional annotation of SARS-CoV-2 genomes
?:type
?:year
  • 2020-12-26

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